Derived from GObase (The Organelle Genome Database)
Gene and product list for Mitochondria
| gene_name | useful_for_REDIdb | prod_name |
|---|---|---|
| atp1 | atp1 | ATP synthase F1 subunit alpha |
| atp2 | atp2 | ATP synthase F1 subunit beta |
| atp3 | atp3 | ATP synthase F1 subunit gamma |
| atp4 | atp4 | ATP synthase F1 subunit b |
| atp6 | atp6 | ATP synthase F0 subunit 6 |
| atp8 | atp8 | ATP synthase F0 subunit 8 |
| atp9 | atp9 | ATP synthase F0 subunit 9 |
| cob | cytb | apocytochrome b |
| cox1 | cox1 | cytochrome c oxidase subunit 1 |
| cox2 | cox2 | cytochrome c oxidase subunit 2 |
| cox3 | cox3 | cytochrome c oxidase subunit 3 |
| g3 | gre3 | G-rich region 3 |
| g4 | gre4 | G-rich region 4 |
| matR | matR | maturase R |
| nad1 | nad1 | NADH dehydrogenase subunit 1 |
| nad2 | nad2 | NADH dehydrogenase subunit 2 |
| nad3 | nad3 | NADH dehydrogenase subunit 3 |
| nad4 | nad4 | NADH dehydrogenase subunit 4 |
| nad4L | nad4L | NADH dehydrogenase subunit 4L |
| nad5 | nad5 | NADH dehydrogenase subunit 5 |
| nad6 | nad6 | NADH dehydrogenase subunit 6 |
| nad7 | nad7 | NADH dehydrogenase subunit 7 |
| nad8 | nad8 | NADH dehydrogenase subunit 8 |
| nad9 | nad9 | NADH dehydrogenase subunit 9 |
| orf# | orf# | unidentified protein (# = number of amino acids) |
| rnpB | rnpB | ribonuclease P RNA |
| rpl1 | rpl1 | ribosomal protein L1 |
| rpl11 | rpl11 | ribosomal protein L11 |
| rpl12 | rpl12 | ribosomal protein L12 |
| rpl13 | rpl13 | ribosomal protein L13 |
| rpl14 | rpl14 | ribosomal protein L14 |
| rpl15 | rpl15 | ribosomal protein L15 |
| rpl16 | rpl16 | ribosomal protein L16 |
| rpl17 | rpl17 | ribosomal protein L17 |
| rpl18 | rpl18 | ribosomal protein L18 |
| rpl19 | rpl19 | ribosomal protein L19 |
| rpl2 | rpl2 | ribosomal protein L2 |
| rpl20 | rpl20 | ribosomal protein L20 |
| rpl21 | rpl21 | ribosomal protein L21 |
| rpl22 | rpl22 | ribosomal protein L22 |
| rpl23 | rpl23 | ribosomal protein L25 |
| rpl24 | rpl24 | ribosomal protein L24 |
| rpl27 | rpl27 | ribosomal protein L27 |
| rpl28 | rpl28 | ribosomal protein S28 |
| rpl29 | rpl29 | ribosomal protein L29 |
| rpl3 | rpl3 | ribosomal protein L3 |
| rpl30 | rpl30 | ribosomal protein L30 |
| rpl31 | rpl31 | ribosomal protein L31 |
| rpl32 | rpl32 | ribosomal protein L32 |
| rpl33 | rpl33 | ribosomal protein L33 |
| rpl34 | rpl34 | ribosomal protein L34 |
| rpl35 | rpl35 | ribosomal protein L35 |
| rpl36 | rpl36 | ribosomal protein L36 |
| rpl4 | rpl4 | ribosomal protein L4 |
| rpl5 | rpl5 | ribosomal protein L5 |
| rpl6 | rpl6 | ribosomal protein L6 |
| rpl7 | rpl7 | ribosomal protein L7 |
| rpl9 | rpl9 | ribosomal protein L9 |
| rpoA | rpoA | RNA polymerase subunit alpha |
| rpoB | rpoB | RNA polymerase subunit beta |
| rpoC | rpoC | RNA polymerase subunit beta' |
| rpoD | rpoD | RNA polymerase subunit sigma factor |
| rps1 | rps1 | ribosomal protein S1 |
| rps10 | rps10 | ribosomal protein S10 |
| rps11 | rps11 | ribosomal protein S11 |
| rps12 | rps12 | ribosomal protein S12 |
| rps13 | rps13 | ribosomal protein S13 |
| rps14 | rps14 | ribosomal protein S14 |
| rps15 | rps15 | ribosomal protein S15 |
| rps16 | rps16 | ribosomal protein S16 |
| rps17 | rps17 | ribosomal protein S17 |
| rps18 | rps18 | ribosomal protein S18 |
| rps19 | rps19 | ribosomal protein S19 |
| rps2 | rps2 | ribosomal protein S2 |
| rps20 | rps20 | ribosomal protein S20 |
| rps3 | rps3 | ribosomal protein S3 |
| rps4 | rps4 | ribosomal protein S4 |
| rps5 | rps5 | ribosomal protein S5 |
| rps6 | rps6 | ribosomal protein S6 |
| rps7 | rps7 | ribosomal protein S7 |
| rps8 | rps8 | ribosomal protein S8 |
| rps9 | rps9 | ribosomal protein S9 |
| rrn5 | rrn5 | 5S rRNA |
| rrn16 | rrn16 | 16S rRNA |
| rrn18 | rrn18 | 18S rRNA |
| sdh1 | sdh1 | succinate dehydrogenase subunit 1 |
| sdh2 | sdh2 | succinate dehydrogenase subunit 2 |
| sdh3 | sdh3 | succinate dehydrogenase subunit 3 |
| sdh4 | sdh4 | succinate dehydrogenase subunit 4 |
| secY | secY | SecY-type transporter protein |
| trnA(ugc) | trnA | transfer RNA Alanine |
| trnC(gca) | trnC | transfer RNA Cysteine |
| trnD(guc) | trnD | transfer RNA Aspartic Acid |
| trnE(uuc) | trnE | transfer RNA Glutamic Acid |
| trnF(aaa) | trnF | transfer RNA Phenylalanine |
| trnF(gaa) | trnF | transfer RNA Phenylalanine |
| trnG(gcc) | trnG | transfer RNA Glycine |
| trnG(ucc) | trnG | transfer RNA Glycine |
| trnH(gug) | trnH | transfer RNA Histidine |
| trnI(cau) | trnI | transfer RNA Isoleucine |
| trnI(gau) | trnI | transfer RNA Isoleucine |
| trnI(uau) | trnI | transfer RNA Isoleucine |
| trnK(cuu) | trnK | transfer RNA Lysine |
| trnK(uuu) | trnK | transfer RNA Lysine |
| trnL(aag) | trnL | transfer RNA Leucine |
| trnL(caa) | trnL | transfer RNA Leucine |
| trnL(gag) | trnL | transfer RNA Leucine |
| trnL(uaa) | trnL | transfer RNA Leucine |
| trnL(uag) | trnL | transfer RNA Leucine |
| trnM(cau) | trnM | transfer RNA Methionine |
| trnM(uau) | trnM | transfer RNA Methionine |
| trnN(guu) | trnN | transfer RNA Asparagine |
| trnP(ggg) | trnP | transfer RNA Proline |
| trnP(ugg) | trnP | transfer RNA Proline |
| trnQ(uug) | trnQ | transfer RNA Glutamine |
| trnR(acg) | trnR | transfer RNA Arginine |
| trnR(ccg) | trnR | transfer RNA Arginine |
| trnR(gcg) | trnR | transfer RNA Arginine |
| trnR(ucg) | trnR | transfer RNA Arginine |
| trnR(ucu) | trnR | transfer RNA Arginine |
| trnS(cga) | trnS | transfer RNA Serine |
| trnS(gcu) | trnS | transfer RNA Serine |
| trnS(gga) | trnS | transfer RNA Serine |
| trnS(uga) | trnS | transfer RNA Serine |
| trnT(ggu) | trnT | transfer RNA Threonine |
| trnT(ugc) | trnT | transfer RNA Threonine |
| trnT(ugu) | trnT | transfer RNA Threonine |
| trnV(gac) | trnV | transfer RNA Valine |
| trnV(uac) | trnV | transfer RNA Valine |
| trnW(cca) | trnW | transfer RNA Tryptophan |
| trnW(uca) | trnW | transfer RNA Tryptophan |
| trnY(gua) | trnY | transfer RNA Tyrosine |
| tufA | tufA | elongation factor |
| ccmFN1 | ccmFN1 | cytochrome c biogenesis orf382 |
| ccmFN2 | ccmFN2 | cytochrome c biogenesis orf203 |
| ccmF | cccb6c | cytochrome c biogenesis orf452 |
| ccmB | ccb2 | cytochrome c biogenesis orf206 |
| ccmC | ccb3 | cytochrome c biogenesis |
| ccmFn | ccb6n | cytochrome c biogenesis |
| murf2 | murf2 | Maxicircle unidentified reading frame 2 |
Gene and product list for Chloroplasts
| gene_name | useful_for_REDIdb | prod_name |
|---|---|---|
| accD | accD | acetyl-CoA carboxylase beta subunit |
| atpA | atpA | ATP synthase subunit alpha |
| atpB | atpB | ATP synthase subunit beta |
| atpE | atpE | ATP synthase subunit epsilon |
| atpF | atpF | ATP synthase subunit I |
| atpH | atpH | ATP synthase subunit III |
| atpI | atpI | ATP synthase subunit IV |
| ccsA | ccsA | cytochrome c biogenesis |
| chlB | chlB | photochlorophyllide reductase subunit ChlB |
| chlL | chlL | photochlorophyllide reductase subunit ChlL |
| chlN | chlN | photochlorophyllide reductase subunit ChlN |
| clpP | clpP | clp protease proteolytic subunit |
| cysA | cysA | sulfate ABC transporter protein |
| infA | infA | translation initiation factor 1 |
| matK | matK | maturase K |
| ndhA | ndhA | NADH dehydrogenase subunit 1 |
| ndhB | ndhB | NADH dehydrogenase subunit 2 |
| ndhC | ndhC | NADH dehydrogenase subunit 3 |
| ndhD | ndhD | NADH dehydrogenase subunit 4 |
| ndhE | ndhE | NADH dehydrogenase subunit 4L |
| ndhF | ndhF | NADH dehydrogenase subunit 5 |
| ndhG | ndhG | NADH dehydrogenase subunit 6 |
| ndhH | ndhH | NADH dehydrogenase subunit 7 |
| ndhI | ndhI | NADH dehydrogenase subunit I |
| ndhJ | ndhJ | NADH dehydrogenase subunit J |
| ndhK | ndhK | NADH dehydrogenase subunit K |
| petA | petA | cytochrome f |
| petB | petB | cytochrome b6 |
| petD | petD | cytochrome b6/f subunit IV |
| petG | petG | cytochrome b6/f subunit V |
| petL | petL | cytochrome b6/f subunit VI |
| petN | petN | cytochrome b6/f subunit VIII |
| psaA | psaA | photosystem I P700 apoprotein A1 |
| psaB | psaB | photosystem I P700 apoprotein A2 |
| psaJ | psaJ | photosystem I subunit IX |
| psbB | psbB | photosystem II 47 kDa protein |
| psbC | psbC | photosystem II 44 kDa protein |
| psbD | psbD | photosystem II protein D2 |
| psbE | psbE | photosystem II cytochrome b559 subunit alpha |
| psbF | psbF | photosystem II cytochrome b559 subunit beta |
| psbH | psbH | photosystem II phosphoprotein |
| psbJ | psbJ | photosystem II reaction center protein J |
| psbL | psbL | photosystem II reaction center protein L |
| psbM | psbM | photosystem II reaction center protein M |
| psbT | psbT | photosystem II reaction center protein T |
| psbZ | psbZ | photosystem II reaction center protein Z |
| rbcL | rbcL | ribulose 1,5-bisphosphate carboxylase/oxygenase large subunit |
| rpoC1 | rpoC1 | RNA polymerase beta subunit-1 |
| rpoC2 | rpoC2 | RNA polymerase beta subunit-2 |
| ycfX | ycfX | hypothetical protein |